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Links from Protein

Items: 16

1.

Bacterial DNA polymerase III alpha subunit finger domain

Date:
2024-08-14

Family Accession:
NF036968.5
Method:
HMM

2.

Helix-hairpin-helix motif

The HHH domain is a short DNA-binding domain [1]. [1]. 8692686. The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA. Doherty AJ, Serpell LC, Ponting CP;. Nucleic Acids Res 1996;24:2488-2497. (from Pfam)

Date:
2024-10-16

Family Accession:
NF025930.5
Method:
HMM

3.

Bacterial DNA polymerase III alpha NTPase domain

GO Terms:
Biological Process:
DNA replication (GO:0006260)
Molecular Function:
3'-5' exonuclease activity (GO:0008408)
Date:
2024-08-14

Family Accession:
NF019353.5
Method:
HMM

4.

PHP domain-containing protein

The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. [1]. 9685491. Phosphoesterase domains associated with DNA polymerases of diverse origins. Aravind L, Koonin EV;. Nucleic Acids Res 1998;26:3746-3752. (from Pfam)

GO Terms:
Molecular Function:
catalytic activity (GO:0003824)
Date:
2024-10-16

Family Accession:
NF014826.5
Method:
HMM

5.
new record, indexing in progress
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new record, indexing in progress
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new record, indexing in progress
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13.

DNA polymerase III subunit alpha

Catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase

Gene:
dnaE
GO Terms:
Molecular Function:
nucleic acid binding (GO:0003676)
Biological Process:
DNA replication (GO:0006260)
Molecular Function:
3'-5' exonuclease activity (GO:0008408)
Date:
2021-07-21

Family Accession:
NF004226.0
Method:
HMM

14.

DNA polymerase III subunit alpha

Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.

GO Terms:
Biological Process:
DNA replication (GO:0006260)
Molecular Function:
3'-5' exonuclease activity (GO:0008408)
Date:
2021-09-15

Family Accession:
NF005298.0
Method:
HMM

15.

DNA polymerase III subunit alpha

DNA polymerase III alpha subunit is one of the three subunits that make up the catalytic core that contains the polymerase active site

Date:
2017-07-17

Family Accession:
11489404
Method:
Sparcle

16.

DNA polymerase III subunit alpha

All proteins in this family for which functions are known are DNA polymerases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

Gene:
dnaE
GO Terms:
Molecular Function:
DNA-directed DNA polymerase activity (GO:0003887)
Biological Process:
DNA replication (GO:0006260)
Molecular Function:
3'-5' exonuclease activity (GO:0008408)
Cellular Component:
DNA polymerase III complex (GO:0009360)
Date:
2024-06-04

Family Accession:
TIGR00594.1
Method:
HMM

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