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Links from Protein

Items: 6

1.

tRNA pseudouridine(13) synthase TruD

TruD is responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs [1]. The structure of TruD reveals an overall V-shaped molecule which contains an RNA-binding cleft [2]. [1]. 12756329. A novel unanticipated type of pseudouridine synthase with homologs in bacteria, archaea, and eukarya. Kaya Y, Ofengand J;. RNA 2003;9:711-721. [2]. 15135053. X-ray structure of tRNA pseudouridine synthase TruD reveals an inserted domain with a novel fold. Ericsson UB, Nordlund P, Hallberg BM;. FEBS Lett 2004;565:59-64. (from Pfam)

Gene:
truD
GO Terms:
Biological Process:
pseudouridine synthesis (GO:0001522)
Molecular Function:
RNA binding (GO:0003723)
Biological Process:
RNA modification (GO:0009451)
Molecular Function:
pseudouridine synthase activity (GO:0009982)
Date:
2024-10-16
Family Accession:
NF013322.5
Method:
HMM
2.
new record, indexing in progress
Family Accession:
3.
new record, indexing in progress
Family Accession:
4.

tRNA pseudouridine(13) synthase TruD

tRNA pseudouridine(13) synthase TruD catalyzes the isomerization of uridines at positions 13 in tRNA to pseudouridines

Date:
2023-03-15
Family Accession:
10011603
Method:
Sparcle
5.

tRNA pseudouridine(13) synthase TruD

Gene:
truD
GO Terms:
Biological Process:
pseudouridine synthesis (GO:0001522)
Molecular Function:
RNA binding (GO:0003723)
Molecular Function:
pseudouridine synthase activity (GO:0009982)
Date:
2021-08-26
Family Accession:
NF002155.0
Method:
HMM
6.

tRNA pseudouridine(13) synthase TruD

an EGAD loading error caused one member to be called surE, but that's an adjacent gene. MJ11364 is a strong partial match from 50 to 230 aa.

Gene:
truD
GO Terms:
Biological Process:
pseudouridine synthesis (GO:0001522)
Molecular Function:
RNA binding (GO:0003723)
Biological Process:
RNA modification (GO:0009451)
Molecular Function:
pseudouridine synthase activity (GO:0009982)
Date:
2024-05-17
Family Accession:
TIGR00094.1
Method:
HMM
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