Protein Family Models for Protein (Select 504698662) - Protein Family Models

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Items: 5

Select item 4122031.

GTPase

This HMM identifies the P-loop-containing domain of large numbers of GTPases with ribosome-associated functions, including many involved in ribosome maturation (Der, Era, etc), ribosome rescue (HflX), and protein translation (InfB, Tuf, PrfC).

GO Terms:

Molecular Function:: GTP binding (GO:0005525)

Date:: 2024-10-16

Family Accession:: NF014036.5
Method:: HMM

Select item 3896922.

new record, indexing in progress

Family Accession:

Select item 3476313.

new record, indexing in progress

Family Accession:

Select item 1472244.

ribosome biogenesis GTP-binding protein YihA/YsxC

Members of this protein family are a GTPase associated with ribosome biogenesis, currently named YihA in Escherichia coli and YsxC in Gram-positive bacteria. The family is widely but not universally distributed among bacteria. Some members previously were named EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic organellar sequences. This protein is found in about 80 percent of bacterial genomes.

Gene:: yihA

GO Terms:

Molecular Function:: GTPase activity (GO:0003924)

Molecular Function:: GTP binding (GO:0005525)

Cellular Component:: cytoplasm (GO:0005737)

Biological Process:: ribosome biogenesis (GO:0042254)

Molecular Function:: ribosome binding (GO:0043022)

Date:: 2021-04-27

Family Accession:: TIGR03598.1
Method:: HMM

Select item 797735.

GTP-binding protein

GTP-binding protein similar to YsxC/EngB, a GTPase associated with ribosome biogenesis; belongs to the large superfamily of translation factor-related (TRAFAC) GTPases