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Links from Protein

Items: 14

1.

4Fe-4S dicluster domain-containing protein

This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024924.5
Method:
HMM
2.

4Fe-4S dicluster domain-containing protein

Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024581.5
Method:
HMM
3.

lactate utilisation protein LutB domain-containing protein

This domain is functionally uncharacterised. This domain is found at the C-terminal of a family of 4Fe-4S, iron-sulphur cluster binding proteins, including Lactate utilisation protein B (LutB). These proteins have a perfect 4Fe-4S binding motif C-x(2)-C-x(2)-C-x(3)-CP followed by either a perfect or imperfect (the first Cys replaced by Ser) second copy. Members probably bind two 4Fe-4S iron-sulphur clusters. This domain is found in LutB proteins in association with the LUD domain (Pfam:PF02589) and usually Fer4_8 (Pfam:PF13183). The LutABC operon is involved in lactate-utilisation and is essential [1,2]. [1]. 24274019. LUD, a new protein domain associated with lactate utilization.. Hwang WC, Bakolitsa C, Punta M, Coggill PC, Bateman A, Axelrod. HL, Rawlings ND, Sedova M, Peterson SN, Eberhardt RY, Aravind L,. Pascual J, Godzik A;. BMC Bioinformatics. 2013;14:341.. [2]. 19201793. A widely conserved gene cluster required for lactate utilization. in Bacillus subtilis and its involvement in biofilm formation.. Chai Y, Kolter R, Losick R;. J Bacteriol. 2009;191:2423-2430. (from Pfam)

Date:
2024-08-14
Family Accession:
NF023298.5
Method:
HMM
4.

LUD domain-containing protein

This entry represents a domain found in lactate utilization proteins B (LutB) and C (LutC), as well as several uncharacterised proteins. LutB and LutC are encoded by th conserved LutABC operon in bacteria. They are involved in lactate utilization and is implicated in the oxidative conversion of L-lactate into pyruvate [1, 2] [1]. 19201793. A widely conserved gene cluster required for lactate utilization. in Bacillus subtilis and its involvement in biofilm formation.. Chai Y, Kolter R, Losick R;. J Bacteriol. 2009;191:2423-2430.. [2]. 24274019. LUD, a new protein domain associated with lactate utilization.. Hwang WC, Bakolitsa C, Punta M, Coggill PC, Bateman A, Axelrod. HL, Rawlings ND, Sedova M, Peterson SN, Eberhardt RY, Aravind L,. Pascual J, Godzik A;. BMC Bioinformatics. 2013;14:341. (from Pfam)

Date:
2024-08-14
Family Accession:
NF014628.5
Method:
HMM
5.
new record, indexing in progress
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6.
new record, indexing in progress
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7.
new record, indexing in progress
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8.
new record, indexing in progress
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9.
new record, indexing in progress
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10.
new record, indexing in progress
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11.
new record, indexing in progress
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12.
new record, indexing in progress
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13.

lactate utilization protein B

lactate utilization protein B (LutB) is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source

Date:
2022-10-19
Family Accession:
11439020
Method:
Sparcle
14.

LutB/LldF family L-lactate oxidation iron-sulfur protein

Members of this family, including LutB from Bacillus subtilis and LldF from Shewanella oneidensis, have a perfect 4Fe-4S binding motif C-x(2)-C-x(2)-C-x(3)-CP followed by either a perfect or imperfect (the first Cys replaced by Ser) second copy. Members probably bind two 4fe-4S iron-sulfur clusters, and are involved in lactate utilization.

GO Terms:
Biological Process:
lactate oxidation (GO:0019516)
Molecular Function:
iron-sulfur cluster binding (GO:0051536)
Date:
2024-07-09
Family Accession:
TIGR00273.1
Method:
HMM
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