Protein Family Models for Protein (Select 515741997) - Protein Family Models

Select item 4240321.

NAD(P)-binding protein

Date:: 2024-08-14

Family Accession:: NF024842.5
Method:: HMM

Select item 4120292.

FAD-dependent oxidoreductase

Date:: 2024-08-14

Family Accession:: NF013314.5
Method:: HMM

Select item 4001153.

new record, indexing in progress

Family Accession:

Select item 3895804.

new record, indexing in progress

Family Accession:

Select item 3585805.

new record, indexing in progress

Family Accession:

Select item 3473386.

new record, indexing in progress

Family Accession:

Select item 3469417.

new record, indexing in progress

Family Accession:

Select item 815098.

methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO

methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO modifies tRNA containing uridine at position 54 to form a 5-methyluridine (ribothymidine)

Date:: 2017-03-27

Family Accession:: 10787361
Method:: Sparcle

Select item 353459.

methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO

Gene:: trmFO

GO Terms:

Biological Process:: tRNA processing (GO:0008033)

Molecular Function:: flavin adenine dinucleotide binding (GO:0050660)

Date:: 2021-08-04

Family Accession:: NF003739.0
Method:: HMM

Select item 1642010.

FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO

This model represents an orthologous set of proteins present in relatively few bacteria but very tightly conserved where it occurs. It is closely related to gidA (glucose-inhibited division protein A), which appears to be present in all complete eubacterial genomes so far and in Saccharomyces cerevisiae. It was designated gid but is now recognized as a tRNA:m(5)U-54 methyltransferase and is now designated trmFO.

Gene:: trmFO

GO Terms:

Cellular Component:: cytoplasm (GO:0005737)

Biological Process:: tRNA processing (GO:0008033)

Molecular Function:: tRNA (uracil(54)-C5)-methyltransferase activity, 5,10-methylenetetrahydrofolate-dependent (GO:0047151)

Molecular Function:: flavin adenine dinucleotide binding (GO:0050660)

Date:: 2024-05-30

Family Accession:: TIGR00137.1
Method:: HMM

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