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Links from Protein

Items: 5

1.

PD-(D/E)XK nuclease family transposase

Members of this family belong to the PD-(D/E)XK nuclease superfamily [1]. These proteins are transposase proteins. [1]. 15972856. Identification of novel restriction endonuclease-like fold families among hypothetical proteins. Kinch LN, Ginalski K, Rychlewski L, Grishin NV;. Nucleic Acids Res. 2005;33:3598-3605. (from Pfam)

Date:
2024-10-16
Family Accession:
NF024194.5
Method:
HMM
2.
new record, indexing in progress
Family Accession:
3.
new record, indexing in progress
Family Accession:
4.

Rpn family recombination-promoting nuclease/putative transposase

The Rpn (Recombination-Promoting Nuclease) family includes YhgA, YadD, YfaD, and YfcI from Escherichia coli K-12, but also several paralogous families in Treponema denticola that are well enough conserved to suggest the proteins are transposases. Characterization of YhgA found magnesium-dependent, calcium-stimulated DNA endonuclease activity that promotes DNA incorporation, but stopped short of classifying YhgA as a transposase.

Date:
2022-03-28
Family Accession:
TIGR01784.1
Method:
HMM
5.

Rpn family recombination-promoting nuclease/putative transposase

Rpn family recombination-promoting nuclease/putative transposase belonging to the PD-(D/E)XK nuclease superfamily is associated with transposition, inversion, or recombination

Date:
2024-12-16
Family Accession:
11493162
Method:
Sparcle
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