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Links from Protein

Items: 20

1.

SurA N-terminal domain-containing protein

This domain is found at the N-terminus of the chaperone SurA and related proteins such as PpiD and foldase PrsA [1,2]. It is a helical domain that together with the C-terminal, forms a domain containing substrate-binding sites [2,3]. The C-terminal of the SurA protein folds back and forms part of this domain also but is not included in the current alignment. [1]. 12429090. Crystallographic structure of SurA, a molecular chaperone that facilitates folding of outer membrane porins. Bitto E, McKay DB;. Structure. 2002;10:1489-1498. [2]. 20970503. The crystal structure of the leptospiral hypothetical protein LIC12922 reveals homology with the periplasmic chaperone SurA. Giuseppe PO, Von Atzingen M, Nascimento AL, Zanchin NI, Guimaraes BG;. J Struct Biol. 2011;173:312-322. [3]. 32358557. Inter-domain dynamics in the chaperone SurA and multi-site binding to its outer membrane protein clients. Calabrese AN, Schiffrin B, Watson M, Karamanos TK, Walko M, Humes JR, Horne JE, White P, Wilson AJ, Kalli AC, Tuma R, Ashcroft AE, Brockwell DJ, Radford SE;. Nat Commun. 2020;11:2155. (from Pfam)

Date:
2024-10-16
Family Accession:
NF025010.5
Method:
HMM
2.

SurA N-terminal domain-containing protein

This domain is found at the N-terminal of the chaperone SurA and related proteins such as PpiD and foldase PrsA [1,2,3]. This is a helical domain that together with the C-terminal forms a domain containing substrate-binding sites [2,3]. The C-terminal of the SurA protein folds back and forms part of this domain also but is not included in the current alignment. [1]. 12429090. Crystallographic structure of SurA, a molecular chaperone that facilitates folding of outer membrane porins. Bitto E, McKay DB;. Structure. 2002;10:1489-1498. [2]. 32358557. Inter-domain dynamics in the chaperone SurA and multi-site binding to its outer membrane protein clients. Calabrese AN, Schiffrin B, Watson M, Karamanos TK, Walko M, Humes JR, Horne JE, White P, Wilson AJ, Kalli AC, Tuma R, Ashcroft AE, Brockwell DJ, Radford SE;. Nat Commun. 2020;11:2155. [3]. 20970503. The crystal structure of the leptospiral hypothetical protein LIC12922 reveals homology with the periplasmic chaperone SurA. Giuseppe PO, Von Atzingen M, Nascimento AL, Zanchin NI, Guimaraes BG;. J Struct Biol. 2011;173:312-322. (from Pfam)

Date:
2024-10-16
Family Accession:
NF025009.5
Method:
HMM
3.

peptidyl-prolyl cis-trans isomerase

GO Terms:
Molecular Function:
peptidyl-prolyl cis-trans isomerase activity (GO:0003755)
Date:
2024-08-14
Family Accession:
NF024545.5
Method:
HMM
4.

peptidylprolyl isomerase

Rotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline. (from Pfam)

Date:
2024-08-14
Family Accession:
NF025002.5
Method:
HMM
5.

SurA N-terminal domain

This domain is found at the N-terminal of the chaperone SurA, a chaperone that assists correct folding of outer membrane proteins (OMPs) in Gram-negative bacteria [1]. This is the helical domain found at the N-terminal of SurA that, together with the C-terminal, forms a core domain which contains OMP binding sites. OMP binding induces conformational changes of SurA domains that protect OMPs from misfolding and aggregation [2]. The C-terminal of the SurA protein folds back and forms part of this domain also but is not included in the current alignment. [1]. 12429090. Crystallographic structure of SurA, a molecular chaperone that facilitates folding of outer membrane porins. Bitto E, McKay DB;. Structure. 2002;10:1489-1498. [2]. 32358557. Inter-domain dynamics in the chaperone SurA and multi-site binding to its outer membrane protein clients. Calabrese AN, Schiffrin B, Watson M, Karamanos TK, Walko M, Humes JR, Horne JE, White P, Wilson AJ, Kalli AC, Tuma R, Ashcroft AE, Brockwell DJ, Radford SE;. Nat Commun. 2020;11:2155. (from Pfam)

Date:
2024-10-16
Family Accession:
NF020872.5
Method:
HMM
6.

peptidylprolyl isomerase

Rotamases increase the rate of protein folding by catalysing the interconversion of cis-proline and trans-proline. (from Pfam)

GO Terms:
Molecular Function:
peptidyl-prolyl cis-trans isomerase activity (GO:0003755)
Date:
2024-08-14
Family Accession:
NF012846.5
Method:
HMM
7.
new record, indexing in progress
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8.
new record, indexing in progress
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9.
new record, indexing in progress
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10.
new record, indexing in progress
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11.
new record, indexing in progress
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12.
new record, indexing in progress
Family Accession:
13.
new record, indexing in progress
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14.
new record, indexing in progress
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15.
new record, indexing in progress
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16.
new record, indexing in progress
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17.
new record, indexing in progress
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18.
new record, indexing in progress
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19.

peptidylprolyl isomerase SurA

peptidylprolyl isomerase SurA protein is a periplasmic molecular chaperone that facilitates correct folding of outer membrane porins, catalyzing the interconversion of cis- and trans-peptidylproline

Date:
2018-03-22
Family Accession:
11484933
Method:
Sparcle
20.

peptidylprolyl isomerase SurA

Gene:
surA
GO Terms:
Molecular Function:
peptidyl-prolyl cis-trans isomerase activity (GO:0003755)
Biological Process:
protein folding (GO:0006457)
Cellular Component:
outer membrane-bounded periplasmic space (GO:0030288)
Molecular Function:
peptide binding (GO:0042277)
Biological Process:
Gram-negative-bacterium-type cell outer membrane assembly (GO:0043165)
Biological Process:
protein stabilization (GO:0050821)
Molecular Function:
unfolded protein binding (GO:0051082)
Biological Process:
maintenance of stationary phase (GO:0060274)
Date:
2021-09-01
Family Accession:
NF008038.0
Method:
HMM
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