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Links from Protein

Items: 5

1.

RlpA-like double-psi beta-barrel domain-containing protein

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold [3,4]. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli [1]. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Recent studies show that the full-length RlpA protein from Pseudomonas Aeruginosa is an outer membrane protein that is a lytic transglycolase with specificity for peptidoglycan lacking stem peptides. Residue D157 in UniProtKB:Q9X6V6 is critical for lytic activity [5]. [1]. 8576052. Multicopy suppressors of prc mutant Escherichia coli include two. HtrA (DegP) protease homologs (HhoAB), DksA, and a truncated. R1pA.. Bass S, Gu Q, Christen A;. J Bacteriol 1996;178:1154-1161.. [2]. 3316191. Genes encoding two lipoproteins in the leuS-dacA region of the. Escherichia coli chromosome.. Takase I, Ishino F, Wachi M, Kamata H, Doi M, Asoh S, Matsuzawa. H, Ohta T, Matsuhashi M;. J Bacteriol 1987;169:5692-5699.. [3]. 10610264. N-ethylmaleimide-sensitive fusion protein (NSF) and CDC48. confirmed as members of the double-psi beta-barrel aspartate. decarboxylase/formate dehydrogenase family.. Mizuguchi K, Dhanaraj V, Blundell TL, Murzin AG;. Structure Fold Des. 1999;7:215-216.. [4]. 10368289. A six-stranded double-psi beta barrel is shared by several. protein superfamilies.. Castillo RM, Mizuguchi K, Dhanaraj V, Albert A, Blundell TL,. Murzin AG;. Structure Fold Des 1999;7. TRUNCATED at 1650 bytes (from Pfam)

Date:
2024-08-14
Family Accession:
NF015298.5
Method:
HMM
2.
new record, indexing in progress
Family Accession:
3.
new record, indexing in progress
Family Accession:
4.

septal ring lytic transglycosylase RlpA family protein

septal ring lytic transglycosylase RlpA family protein similar to endolytic peptidoglycan transglycosylase RlpA (rare lipoprotein A), a lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides

Date:
2023-11-01
Family Accession:
15350278
Method:
Sparcle
5.

septal ring lytic transglycosylase RlpA family protein

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

GO Terms:
Molecular Function:
lyase activity (GO:0016829)
Date:
2021-07-23
Family Accession:
TIGR00413.1
Method:
HMM
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