Protein Family Models

This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers. [1]. 20805221. Structural and mechanistic classification of uronic acid-containing polysaccharide lyases. Garron ML, Cygler M;. Glycobiology. 2010;20:1547-1573. [2]. 20851883. The active site of oligogalacturonate lyase provides unique insights into cytoplasmic oligogalacturonate beta-elimination. Abbott DW, Gilbert HJ, Boraston AB;. J Biol Chem. 2010;285:39029-39038. (from Pfam)

Date:

2024-10-16

This family appears to be related to the Pfam:PF00400 repeat. This repeat corresponds to the RIVW repeat identified in cell surface proteins [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16]. [1]. 8090199. The ancient regulatory-protein family of WD-repeat proteins. Neer EJ, Schmidt CJ, Nambudripad R, Smith TF;. Nature 1994;371:297-300. (from Pfam)

Date:

2024-10-16

Gene:

ogl

Date:

2023-07-14

oligogalacturonate lyase family protein similar to Dickeya dadantii oligogalacturonate lyase that catalyzes the conversion of saturated and unsaturated digalacturonate into monogalacturonate using a beta-elimination mechanism

Date:

2020-07-16