Protein Family Models for Protein (Select 754513375) - Protein Family Models

Select item 4186091.

Oligopeptide/dipeptide transporter, C-terminal region

This family features a region found towards the C-terminus of oligopeptide ABC transporter ATP binding proteins, immediately following the ATP-binding domain (Pfam:PF00005). All characterised members appear able to be involved in the transport of oligopeptides or dipeptides. Some are important for sporulation or antibiotic resistance. Some dipeptide transporters also act on the heme precursor delta-aminolevulinic acid. (from Pfam)

GO Terms:

Molecular Function:: nucleotide binding (GO:0000166)

Molecular Function:: ATP binding (GO:0005524)

Biological Process:: peptide transport (GO:0015833)

Date:: 2024-08-14

Family Accession:: NF019951.5
Method:: HMM

Select item 4111432.

ATP-binding cassette domain-containing protein

ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains. [1]. 1864505. Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Rosteck PR Jr, Reynolds PA, Hershberger CL;. Gene 1991;102:27-32. [2]. 1977073. Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Blight MA, Holland IB;. Mol Microbiol 1990;4:873-880. [3]. 2229036. Binding protein-dependent transport systems. Higgins CF, Hyde SC, Mimmack MM, Gileadi U, Gill DR, Gallagher MP;. J Bioenerg Biomembr 1990;22:571-592. [4]. 9872322. Crystal structure of the ATP-binding subunit of an ABC transporter. Hung LW, Wang IX, Nikaido K, Liu PQ, Ames GF, Kim SH;. Nature 1998;396:703-707. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Date:: 2024-10-16

Family Accession:: NF012235.5
Method:: HMM

Select item 3953653.

new record, indexing in progress

Family Accession:

Select item 3893024.

new record, indexing in progress

Family Accession:

Select item 3673445.

dipeptide ABC transporter ATP-binding subunit DppF

Gene:: dppF

GO Terms:

Cellular Component:: membrane (GO:0016020)

Biological Process:: dipeptide transport (GO:0042938)

Molecular Function:: dipeptide transmembrane transporter activity (GO:0071916)

Date:: 2023-10-26

Family Accession:: NF043071.1
Method:: HMM

Select item 3535616.

new record, indexing in progress

Family Accession:

Select item 3474347.

new record, indexing in progress

Family Accession:

Select item 3367678.

new record, indexing in progress

Family Accession:

Select item 1423729.

oligopeptide/dipeptide ABC transporter ATP-binding protein

This HMM represents a domain found in the C-terminal regions of ABC transporter ATP binding proteins, immediately following the ATP-binding domain (PF00005). Many are involved in the transport of oligopeptides or dipeptides, including E. coli K-12 proteins DppD (dipeptide/heme), OppD and OppF (oligopeptide), DdpD and DdpF (D,D-dipeptide), etc.

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Cellular Component:: cytoplasmic side of plasma membrane (GO:0009898)

Molecular Function:: ABC-type peptide transporter activity (GO:0015440)

Biological Process:: peptide transport (GO:0015833)

Cellular Component:: ATP-binding cassette (ABC) transporter complex (GO:0043190)

Date:: 2023-11-07

Family Accession:: TIGR01727.1
Method:: HMM

Select item 6040010.

peptide ABC transporter ATP-binding protein

peptide ABC transporter ATP-binding protein similar to Pseudomonas aeruginosa DppF, which is part of the ABC transporter DppABCDF involved in the uptake of various di/tripeptides and responsible for energy coupling to the transport system

Date:: 2023-02-21

Family Accession:: 11485313
Method:: Sparcle

Select item 2609811.

dipeptide ABC transporter ATP-binding protein

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Biological Process:: peptide transport (GO:0015833)

Date:: 2021-07-22

Family Accession:: NF008453.0
Method:: HMM

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