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Links from Protein

Items: 17

1.

CheY binding

Members of this family adopt a secondary structure consisting of an open-face beta/alpha sandwich, with four antiparallel beta-strands and two alpha-helices. They bind to a corresponding domain on CheY, with subsequent phosphorylation of the CheY Asp57 residue, and activation of CheY, which then affects flagellar rotation [1]. [1]. 11134926. Further insights into the mechanism of function of the response regulator CheY from crystallographic studies of the CheY--CheA(124--257) complex. Gouet P, Chinardet N, Welch M, Guillet V, Cabantous S, Birck C, Mourey L, Samama JP;. Acta Crystallogr D Biol Crystallogr. 2001;57:44-51. (from Pfam)

Date:
2024-10-16
Family Accession:
NF020644.5
Method:
HMM
2.

Signal transducing histidine kinase, homodimeric domain

This helical bundle domain is the homodimer interface of the signal transducing histidine kinase family. [1]. 9989504. Structure of CheA, a signal-transducing histidine kinase. Bilwes AM, Alex LA, Crane BR, Simon MI;. Cell 1999;96:131-141. (from Pfam)

GO Terms:
Molecular Function:
phosphorelay sensor kinase activity (GO:0000155)
Biological Process:
phosphorelay signal transduction system (GO:0000160)
Molecular Function:
protein histidine kinase activity (GO:0004673)
Cellular Component:
cytoplasm (GO:0005737)
Biological Process:
chemotaxis (GO:0006935)
Date:
2024-10-16
Family Accession:
NF014894.5
Method:
HMM
3.

ATP-binding protein

This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90. [1]. 18361456. Crystal structure of a novel non-Pfam protein AF1514 from Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray source. Li Y, Bahti P, Shaw N, Song G, Chen S, Zhang X, Zhang M, Cheng C, Yin J, Zhu JY, Zhang H, Che D, Xu H, Abbas A, Wang BC, Liu ZJ;. Proteins 2008;71:2109-13. (from Pfam)

Date:
2024-10-16
Family Accession:
NF014567.5
Method:
HMM
4.

Hpt domain-containing protein

The histidine-containing phosphotransfer (HPt) domain is a novel protein module with an active histidine residue that mediates phosphotransfer reactions in the two-component signaling systems. A multistep phosphorelay involving the HPt domain has been suggested for these signaling pathways. The crystal structure of the HPt domain of the anaerobic sensor kinase ArcB has been determined [1]. The domain consists of six alpha helices containing a four-helix bundle-folding. The pattern of sequence similarity of the HPt domains of ArcB and components in other signaling systems can be interpreted in light of the three-dimensional structure and supports the conclusion that the HPt domains have a common structural motif both in prokaryotes and eukaryotes. In S. cerevisiae ypd1p this domain has been shown to contain a binding surface for Ssk1p (response regulator receiver domain containing protein Pfam:PF00072) [2]. [1]. 9054511. Insights into multistep phosphorelay from the crystal structure of the C-terminal HPt domain of ArcB. Kato M, Mizuno T, Shimizu T, Hakoshima T;. Cell 1997;88:717-723. [2]. 12582120. Ssk1p response regulator binding surface on histidine- containing phosphotransfer protein ypd1p. Porter SW, Xu Q, West AH;. Eukaryot Cell 2003;2:27-33. (from Pfam)

GO Terms:
Biological Process:
phosphorelay signal transduction system (GO:0000160)
Date:
2024-10-16
Family Accession:
NF013767.5
Method:
HMM
5.

chemotaxis protein CheW

CheW proteins are part of the chemotaxis signaling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in CheA [1] binds to CheW, suggesting that these domains can interact with each other. [1]. 9989504. Structure of CheA, a signal-transducing histidine kinase. Bilwes AM, Alex LA, Crane BR, Simon MI;. Cell 1999;96:131-141. (from Pfam)

GO Terms:
Biological Process:
chemotaxis (GO:0006935)
Biological Process:
signal transduction (GO:0007165)
Date:
2024-10-16
Family Accession:
NF013731.5
Method:
HMM
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
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8.
new record, indexing in progress
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9.
new record, indexing in progress
Family Accession:
10.
new record, indexing in progress
Family Accession:
11.
new record, indexing in progress
Family Accession:
12.
new record, indexing in progress
Family Accession:
13.
new record, indexing in progress
Family Accession:
14.
new record, indexing in progress
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15.
new record, indexing in progress
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16.

chemotaxis protein CheA

chemotaxis protein CheA is a sensor histitine protein kinase that transmits sensory signals from chemoreceptors to the flagellar motors

Date:
2018-03-14
Family Accession:
11484784
Method:
Sparcle
17.

chemotaxis protein CheA

Chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component

Gene:
cheA
GO Terms:
Molecular Function:
phosphorelay sensor kinase activity (GO:0000155)
Biological Process:
phosphorelay signal transduction system (GO:0000160)
Biological Process:
chemotaxis (GO:0006935)
Biological Process:
phosphorylation (GO:0016310)
Date:
2021-08-24
Family Accession:
NF007835.0
Method:
HMM
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