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Eukaryotic RefSeq Genome Annotation Status

NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:

Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.

Annotation runs in progress

An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.

Species RefSeq assembly(ies) Annotation Release Freeze Date Status
Globicephala melas (long-finned pilot whale) mGloMel1.2 (GCF_963455315.2) GCF_963455315.2-RS_2024_11 2024-11-21 In sequence databases

On the FTP
Dipodomys merriami (Merriam's kangaroo rat) mDipMer1.0.p (GCF_024711535.1) GCF_024711535.1-RS_2024_11 2024-11-15 In sequence databases

In Gene

On the FTP

Recently completed annotation runs

Genomes annotated in the past 6 weeks.

Species RefSeq assembly(ies) Annotation Release Freeze Date Release Date Links
Narcine bancroftii (Caribbean electric ray) sNarBan1.hap1 (GCF_036971445.1) GCF_036971445.1-RS_2024_11 2024-11-13 2024-11-18 FTP B AR GDV
Dendropsophus ebraccatus (hourglass treefrog) aDenEbr1.pat (GCF_027789765.1) GCF_027789765.1-RS_2024_11 2024-11-13 2024-11-18 FTP B AR GDV
Phaenicophaeus curvirostris (birds) BPBGC_Pcur_1.0 (GCF_032191515.1) GCF_032191515.1-RS_2024_11 2024-11-16 2024-11-17 FTP B AR GDV
Periplaneta americana (American cockroach) P.americana_PAMFEO1_priV1 (GCF_040183065.1) GCF_040183065.1-RS_2024_10 2024-10-17 2024-11-15 FTP B AR GDV
Haliaeetus albicilla (white-tailed eagle) bHalAlb1.1 (GCF_947461875.1) GCF_947461875.1-RS_2024_11 2024-11-13 2024-11-15 FTP B AR GDV
Ranitomeya imitator (mimic poison frog) aRanImi1.pri (GCF_032444005.1) GCF_032444005.1-RS_2024_10 2024-10-25 2024-11-15 FTP B AR GDV
Ambystoma mexicanum (axolotl) UKY_AmexF1_1 (GCF_040938575.1) GCF_040938575.1-RS_2024_10 2024-10-03 2024-11-15 FTP B AR GDV
Semicossyphus pulcher (bony fishes) fSemPul1.0.p (GCF_022749685.1) GCF_022749685.1-RS_2024_11 2024-11-13 2024-11-15 FTP B AR GDV
Brachyistius frenatus (kelp perch) ASM2903083v1 (GCF_029030835.1) GCF_029030835.1-RS_2024_11 2024-11-13 2024-11-15 FTP B AR GDV
Melopsittacus undulatus (budgerigar) bMelUnd1.mat.Z (GCF_012275295.1) GCF_012275295.1-RS_2024_11 2024-11-04 2024-11-06 FTP B AR GDV
Paralichthys olivaceus (Japanese flounder) ASM2471397v2 (GCF_024713975.1) GCF_024713975.1-RS_2024_10 2024-10-17 2024-10-28 FTP B AR GDV
Delphinus delphis (saddleback dolphin) mDelDel1.2 (GCF_949987515.2) GCF_949987515.2-RS_2024_10 2024-10-25 2024-10-28 FTP B AR GDV
Ovis canadensis (bighorn sheep) ARS-UI_OviCan_v1 (GCF_042477335.1) GCF_042477335.1-RS_2024_10 2024-10-22 2024-10-28 FTP B AR GDV
Solanum lycopersicum (tomato) SLM_r2.1 (GCF_036512215.1) GCF_036512215.1-RS_2024_09 2024-09-20 2024-10-24 FTP B AR GDV
Maniola hyperantus (ringlet) iAphHyp1.2 (GCF_902806685.2) GCF_902806685.2-RS_2024_10 2024-10-21 2024-10-24 FTP B AR GDV
Eulemur rufifrons (Bennett's brown lemur) OSU_ERuf_1 (GCF_041146395.1) GCF_041146395.1-RS_2024_10 2024-10-03 2024-10-23 FTP B AR GDV
Procambarus clarkii (red swamp crayfish) FALCON_Pclarkii_2.0 (GCF_040958095.1) GCF_040958095.1-RS_2024_10 2024-10-17 2024-10-23 FTP B AR GDV
Lepisosteus oculatus (spotted gar) fLepOcu1.hap2 (GCF_040954835.1) GCF_040954835.1-RS_2024_09 2024-09-13 2024-10-18 FTP B AR GDV
Neodiprion pinetum (white pine sawfly) iyNeoPine1.2 (GCF_021155775.2) GCF_021155775.2-RS_2024_10 2024-10-11 2024-10-18 FTP B AR GDV
Argopecten irradians (bay scallop) Ai_NY (GCF_041381155.1) GCF_041381155.1-RS_2024_10 2024-10-11 2024-10-18 FTP B AR GDV

Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.

Last updated: 2024-04-04T20:39:01Z