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    JPH1 junctophilin 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100008611, updated on 8-Mar-2024

    Summary

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    Gene symbol
    JPH1
    Gene description
    junctophilin 1
    See related
    Ensembl:ENSOCUG00000007692
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Also known as
    MG72/JP1
    Orthologs
    human mouse all
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    Genomic context

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    See JPH1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 3 NC_067376.1 (89854850..89948663, complement)

    Chromosome 6 - NC_091437.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL42-like Neighboring gene transmembrane protein 70 Neighboring gene ganglioside induced differentiation associated protein 1 Neighboring gene transfer RNA alanine (anticodon UGC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067376.1 Chromosome 3 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Junctophilins: a novel family of junctional membrane complex proteins. Takeshima H, et al. Mol Cell, 2000 Jul. PMID 10949023
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of junctional membrane complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    junctophilin-1
    Names
    JP-1
    junctophilin type 1
    mg72
    mitsugumin-72
    mitsugumin72/junctophilin type1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081996.1 → NP_001075465.1  junctophilin-1

      See identical proteins and their annotated locations for NP_001075465.1

      Status: PROVISIONAL

      Source sequence(s)
      AB023447
      UniProtKB/Swiss-Prot
      Q9GKY8
      UniProtKB/TrEMBL
      A0A5S8IBE0
      Related
      ENSOCUP00000006651.3, ENSOCUT00000007691.3
      Conserved Domains (1) summary
      pfam02493
      Location:304 → 326
      MORN; MORN repeat

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067376.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      89854850..89948663 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008255639.3 → XP_008253861.1  junctophilin-1 isoform X1

      See identical proteins and their annotated locations for XP_008253861.1

      UniProtKB/Swiss-Prot
      Q9GKY8
      UniProtKB/TrEMBL
      A0A5S8IBE0
      Conserved Domains (1) summary
      pfam02493
      Location:304 → 326
      MORN; MORN repeat

    2. XM_008255638.3 → XP_008253860.1  junctophilin-1 isoform X1

      See identical proteins and their annotated locations for XP_008253860.1

      UniProtKB/Swiss-Prot
      Q9GKY8
      UniProtKB/TrEMBL
      A0A5S8IBE0
      Conserved Domains (1) summary
      pfam02493
      Location:304 → 326
      MORN; MORN repeat

    3. XM_008255637.3 → XP_008253859.1  junctophilin-1 isoform X1

      See identical proteins and their annotated locations for XP_008253859.1

      UniProtKB/Swiss-Prot
      Q9GKY8
      UniProtKB/TrEMBL
      A0A5S8IBE0
      Conserved Domains (1) summary
      pfam02493
      Location:304 → 326
      MORN; MORN repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9GKY8.1 GenPept UniProtKB/Swiss-Prot:Q9GKY8

    Gene LinkOut

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