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    CA1 carbonic anhydrase 1 [ Equus caballus (horse) ]

    Gene ID: 100050192, updated on 24-Nov-2024

    Summary

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    Official Symbol
    CA1provided by VGNC
    Official Full Name
    carbonic anhydrase 1provided by VGNC
    Primary source
    VGNC:VGNC:56323
    See related
    Ensembl:ENSECAG00000009144
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Also known as
    CA-I
    Orthologs
    human mouse all
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    Genomic context

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    See CA1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 9 NC_009152.3 (3252935..3290334)

    Chromosome 9 - NC_009152.3Genomic Context describing neighboring genes Neighboring gene carbonic anhydrase 2 Neighboring gene carbonic anhydrase 3 Neighboring gene uncharacterized LOC111774898 Neighboring gene carbonic anhydrase 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009152.3 Chromosome 9 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbonate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbonic anhydrase 1
    Names
    Carbonate dehydratase I
    carbonic anhydrase I
    cyanamide hydratase CA1
    XP_001488605.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001434663.1 → NP_001421592.1  carbonic anhydrase 1

      Status: VALIDATED

      Source sequence(s)
      PJAA01000010

    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009152.3 Reference EquCab3.0 Primary Assembly

      Range
      3252935..3290334
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001488555.4 → XP_001488605.1  carbonic anhydrase 1

      See identical proteins and their annotated locations for XP_001488605.1

      UniProtKB/Swiss-Prot
      P00917
      UniProtKB/TrEMBL
      F6ZBG0
      Related
      ENSECAP00000007854.1, ENSECAT00000010207.3
      Conserved Domains (1) summary
      cl00012
      Location:2 → 261
      alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P00917.3 GenPept UniProtKB/Swiss-Prot:P00917

    Gene LinkOut

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