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    LOC100260094 uncharacterized LOC100260094 [ Vitis vinifera (wine grape) ]

    Gene ID: 100260094, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100260094
    Gene description
    uncharacterized LOC100260094
    Locus tag
    VIT_00028355001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100260094 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 7 NC_081811.1 (6880723..6886860, complement)
    102 previous assembly 12X (GCF_000003745.3) 7 NC_012013.3 (6512599..6518737, complement)

    Chromosome 7 - NC_081811.1Genomic Context describing neighboring genes Neighboring gene putative lysine-specific demethylase JMJ16 Neighboring gene NAC domain-containing protein 21/22 Neighboring gene probable methyltransferase PMT8 Neighboring gene uncharacterized LOC132254060 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article
    2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100260094
    Names
    serine/threonine-protein kinase 19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081811.1 Reference ASM3070453v1 Primary Assembly

      Range
      6880723..6886860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010654083.3 → XP_010652385.1  uncharacterized protein LOC100260094 isoform X3

      Conserved Domains (1) summary
      pfam10494
      Location:36 → 238
      Stk19; Serine-threonine protein kinase 19

    2. XM_002277299.4 → XP_002277335.1  uncharacterized protein LOC100260094 isoform X2

      See identical proteins and their annotated locations for XP_002277335.1

      UniProtKB/TrEMBL
      D7U316
      Conserved Domains (1) summary
      pfam10494
      Location:36 → 265
      Stk19; Serine-threonine protein kinase 19

    3. XM_059737966.1 → XP_059593949.1  uncharacterized protein LOC100260094 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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