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    LOC100370720 nephrocystin-4-like [ Saccoglossus kowalevskii ]

    Gene ID: 100370720, updated on 19-Oct-2023

    Summary

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    Gene symbol
    LOC100370720
    Gene description
    nephrocystin-4-like
    See related
    EnsemblRapid:LOC100370720
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Saccoglossus kowalevskii
    Lineage
    Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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    Genomic context

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    See LOC100370720 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003135836.1 (70855..131112, complement)

    NW_003135836.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100370566 Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating-like Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like Neighboring gene AP-2 complex subunit mu-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003135836 unplaced scaffold reference Skow_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to ciliary transition zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary base IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary transition zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in non-motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nephrocystin-4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Skow_1.1 Primary Assembly

    Genomic

    1. NW_003135836.1 Reference Skow_1.1 Primary Assembly

      Range
      70855..131112 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006819826.1 → XP_006819889.1  nephrocystin-4-like

      Related
      XP_006819889.1, XM_006819826.1
    Nucleotide Protein
    Heading Accession and Version

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