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    NR0B1 nuclear receptor subfamily 0 group B member 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100405594, updated on 8-Mar-2024

    Summary

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    Gene symbol
    NR0B1
    Gene description
    nuclear receptor subfamily 0 group B member 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Also known as
    DAX1; DAX-1
    Orthologs
    human mouse all
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    Genomic context

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    See NR0B1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (29679066..29684183, complement)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (29413316..29418432, complement)

    Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene MAGE family member B4 Neighboring gene MAGE family member B1 Neighboring gene TLR adaptor interacting with endolysosomal SLC15A4 Neighboring gene transcription factor BTF3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Primate DAX1, SRY, and SOX9: evolutionary stratification of sex-determination pathway. Patel M, et al. Am J Hum Genet, 2001 Jan. PMID 11112659, Free PMC Article
    2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 0 group B member 1
    Names
    Nuclear receptor DAX-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071464.1 Reference mCalJa1.2.pat.X

      Range
      29679066..29684183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035288790.2 → XP_035144681.1  nuclear receptor subfamily 0 group B member 1

      UniProtKB/Swiss-Prot
      Q9BG94
      UniProtKB/TrEMBL
      A0A2R8N9M3
      Conserved Domains (2) summary
      cd07350
      Location:231 → 464
      NR_LBD_Dax1; The ligand binding domain of DAX1 protein, a nuclear receptor lacking DNA binding domain
      pfam14046
      Location:134 → 181
      NR_Repeat; Nuclear receptor repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9BG94.1 GenPept UniProtKB/Swiss-Prot:Q9BG94

    Gene LinkOut

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