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    ANKLE1 ankyrin repeat and LEM domain containing 1 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100470996, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ANKLE1
    Gene description
    ankyrin repeat and LEM domain containing 1
    Locus tag
    PANDA_000513
    See related
    Ensembl:ENSAMEG00000010455
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See ANKLE1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (12595582..12600308)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217298.1 (872986..877321)

    Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene USH1 protein network component harmonin binding protein 1 Neighboring gene BRISC and BRCA1 A complex member 1 Neighboring gene abhydrolase domain containing 8 Neighboring gene mitochondrial ribosomal protein L34

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and LEM domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048221.1 Reference ASM200744v2 Primary Assembly

      Range
      12595582..12600308
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034658018.1 → XP_034513909.1  ankyrin repeat and LEM domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      G1LV95

    2. XM_034658015.1 → XP_034513906.1  ankyrin repeat and LEM domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      G1LV95

    3. XM_034658017.1 → XP_034513908.1  ankyrin repeat and LEM domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      G1LV95

    4. XM_034658019.1 → XP_034513910.1  ankyrin repeat and LEM domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      G1LV95
      Related
      ENSAMEP00000010996.2, ENSAMET00000011466.2

    5. XM_034658020.1 → XP_034513911.1  ankyrin repeat and LEM domain-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      G1LV95
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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