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    cltrn collectrin, amino acid transport regulator [ Anolis carolinensis (green anole) ]

    Gene ID: 100555401, updated on 3-Dec-2024

    Summary

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    Gene symbol
    cltrn
    Gene description
    collectrin, amino acid transport regulator
    See related
    Ensembl:ENSACAG00000017031
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Also known as
    tmem27
    Orthologs
    human mouse all
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    Genomic context

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    See cltrn in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 3 NC_085843.1 (99485341..99519736)
    102 previous assembly AnoCar2.0 (GCF_000090745.1) 3 NC_014778.1 (121548250..121580673, complement)

    Chromosome 3 - NC_085843.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 Neighboring gene uncharacterized LOC134297510 Neighboring gene angiotensin converting enzyme 2 Neighboring gene BMX non-receptor tyrosine kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of amino acid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular exosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    collectrin
    Names
    transmembrane protein 27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAnoCar3.1.pri

    Genomic

    1. NC_085843.1 Reference rAnoCar3.1.pri

      Range
      99485341..99519736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003218893.4 → XP_003218941.2  collectrin

      UniProtKB/TrEMBL
      G1KTF4
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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