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    c3h2orf49 chromosome 3 C2orf49 homolog [ Anolis carolinensis (green anole) ]

    Gene ID: 100563398, updated on 8-Mar-2024

    Summary

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    Gene symbol
    c3h2orf49
    Gene description
    chromosome 3 C2orf49 homolog
    See related
    Ensembl:ENSACAG00000045073
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs
    human mouse all
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    Genomic context

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    See c3h2orf49 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 3 NC_085843.1 (116153858..116160362)
    102 previous assembly AnoCar2.0 (GCF_000090745.1) 3 NC_014778.1 (108911742..108918276, complement)

    Chromosome 3 - NC_085843.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 45 Neighboring gene transforming growth factor beta receptor associated protein 1 Neighboring gene four and a half LIM domains 2 Neighboring gene uncharacterized LOC134297551

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in embryonic morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of tRNA-splicing ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ashwin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAnoCar3.1.pri

    Genomic

    1. NC_085843.1 Reference rAnoCar3.1.pri

      Range
      116153858..116160362
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003218768.4 → XP_003218816.1  ashwin

      UniProtKB/TrEMBL
      A0A803TVW2
      Related
      ENSACAP00000039352.1
      Conserved Domains (1) summary
      pfam15323
      Location:31 → 237
      Ashwin; Developmental protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases