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    RPL36 ribosomal protein L36 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100579134, updated on 8-Mar-2024

    Summary

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    Gene symbol
    RPL36
    Gene description
    ribosomal protein L36
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See RPL36 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (4038192..4039227)

    Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene mitochondrial contact site and cristae organizing system subunit 13 Neighboring gene hydroxysteroid 11-beta dehydrogenase 1 like Neighboring gene lon peptidase 1, mitochondrial Neighboring gene cation channel sperm associated auxiliary subunit delta Neighboring gene uncharacterized LOC109490956

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_048221.1 Chromosome 4 Reference ASM200744v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein eL36; 60S ribosomal protein L36

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001304858.1 → NP_001291787.1  large ribosomal subunit protein eL36

      See identical proteins and their annotated locations for NP_001291787.1

      Status: PROVISIONAL

      Source sequence(s)
      HQ318088
      UniProtKB/TrEMBL
      A0A7N5KA13, F2X284
      Conserved Domains (1) summary
      pfam01158
      Location:4 → 94
      Ribosomal_L36e; Ribosomal protein L36e

    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048221.1 Reference ASM200744v2 Primary Assembly

      Range
      4038192..4039227
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034657158.1 → XP_034513049.1  60S ribosomal protein L36 isoform X1

      UniProtKB/TrEMBL
      A0A7N5KA13, F2X284
      Conserved Domains (1) summary
      pfam01158
      Location:4 → 94
      Ribosomal_L36e; Ribosomal protein L36e

    2. XM_011235420.3 → XP_011233722.2  60S ribosomal protein L36 isoform X1

      UniProtKB/TrEMBL
      A0A7N5KA13, F2X284
      Conserved Domains (1) summary
      pfam01158
      Location:4 → 94
      Ribosomal_L36e; Ribosomal protein L36e
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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