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    GJB6 gap junction protein beta 6 [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 100658977, updated on 11-Apr-2024

    Summary

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    Gene symbol
    GJB6
    Gene description
    gap junction protein beta 6
    See related
    EnsemblRapid:ENSLAFG00000005274
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Also known as
    CXNF
    Orthologs
    human mouse all
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    Genomic context

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    See GJB6 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 23 NC_087364.1 (30103509..30104294)
    102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573449.1 (3517618..3518454, complement)

    Chromosome 23 - NC_087364.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 88 Neighboring gene crystallin lambda 1 Neighboring gene gap junction protein beta 2 Neighboring gene gap junction protein alpha 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables gap junction channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in gap junction-mediated intercellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of connexin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gap junction beta-6 protein
    Names
    connexin F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087364.1 Reference mLoxAfr1.hap2

      Range
      30103509..30104294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003413991.3 → XP_003414039.1  gap junction beta-6 protein

      UniProtKB/TrEMBL
      G3SVW9
      Related
      ENSLAFP00000004414.1, ENSLAFT00000005272.2
      Conserved Domains (1) summary
      pfam00029
      Location:2 → 215
      Connexin
    Nucleotide Protein
    Heading Accession and Version

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