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    SLC51B SLC51 subunit beta [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 100673029, updated on 6-Jun-2024

    Summary

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    Gene symbol
    SLC51B
    Gene description
    SLC51 subunit beta
    See related
    EnsemblRapid:ENSLAFG00000030011
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Orthologs
    human mouse all
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    Genomic context

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    See SLC51B in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 13 NC_087354.1 (50826933..50866657, complement)
    102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573479.1 (10871154..10873955)

    Chromosome 13 - NC_087354.1Genomic Context describing neighboring genes Neighboring gene kelch repeat and BTB domain containing 13 Neighboring gene RAS like family 12 Neighboring gene V-type proton ATPase subunit G 1-like Neighboring gene mitochondrial methionyl-tRNA formyltransferase Neighboring gene SPG21 abhydrolase domain containing, maspardin Neighboring gene small nucleolar RNA SNORA9 Neighboring gene ankyrin repeat and death domain containing 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bile acid and bile salt transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein-containing complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    organic solute transporter subunit beta
    Names
    solute carrier family 51 beta subunit
    solute carrier family 51 subunit beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087354.1 Reference mLoxAfr1.hap2

      Range
      50826933..50866657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064267396.1 → XP_064123466.1  organic solute transporter subunit beta

      UniProtKB/TrEMBL
      G3TZN4
      Related
      ENSLAFP00000021042.2, ENSLAFT00000026958.2

    2. XM_003418362.3 → XP_003418410.1  organic solute transporter subunit beta

      UniProtKB/TrEMBL
      G3TZN4
      Conserved Domains (1) summary
      pfam15048
      Location:3 → 124
      OSTbeta; Organic solute transporter subunit beta protein
    Nucleotide Protein
    Heading Accession and Version

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