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    ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100699645, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ppp1r1b
    Gene description
    protein phosphatase 1, regulatory (inhibitor) subunit 1B
    See related
    Ensembl:ENSONIG00000030540
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
    Orthologs
    zebrafish all
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    Genomic context

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    See ppp1r1b in Genome Data Viewer
    Location:
    chromosome: LG4
    Exon count:
    8
    Annotation release Status Assembly LG Location
    104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG4 NC_031969.2 (27011463..27042556)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG4 NC_031969.1 (9756751..9787760, complement)

    Linkage Group LG4 - NC_031969.2Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 12 Neighboring gene neuronal differentiation 2 Neighboring gene StAR related lipid transfer domain containing 3 Neighboring gene melanoregulin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein phosphatase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031969.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      27011463..27042556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013269636.3 → XP_013125090.2  protein phosphatase 1 regulatory subunit 1B isoform X3

      UniProtKB/TrEMBL
      A0A669CS47
      Related
      ENSONIP00000050836.1, ENSONIT00000084082.1

    2. XM_025906394.1 → XP_025762179.1  protein phosphatase 1 regulatory subunit 1B isoform X4

      Conserved Domains (1) summary
      pfam05395
      Location:20 → 140
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32

    3. XM_019357710.2 → XP_019213255.1  protein phosphatase 1 regulatory subunit 1B isoform X3

      UniProtKB/TrEMBL
      A0A669CS47

    4. XM_019357708.2 → XP_019213253.1  protein phosphatase 1 regulatory subunit 1B isoform X1

      Conserved Domains (1) summary
      pfam05395
      Location:12 → 149
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32

    5. XM_019357709.2 → XP_019213254.1  protein phosphatase 1 regulatory subunit 1B isoform X2

      UniProtKB/TrEMBL
      A0A669DCQ1
      Related
      ENSONIP00000056095.1, ENSONIT00000033958.1
      Conserved Domains (1) summary
      pfam05395
      Location:12 → 147
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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