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    Znf518a zinc finger protein 518A [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100754952, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Znf518a
    Gene description
    zinc finger protein 518A
    See related
    Ensembl:ENSCGRG00015025352
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Znf518a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613664.1 (274526..294720)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (20659425..20679845, complement)

    NW_003613664.1Genomic Context describing neighboring genes Neighboring gene coiled-coil and C2 domain containing 2B Neighboring gene cyclin J Neighboring gene B cell linker Neighboring gene DNA nucleotidylexotransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 518A
    Names
    Zinc finger protein 518

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613664.1 Reference CriGri_1.0 Primary Assembly

      Range
      274526..294720
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027399669.2 → XP_027255470.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, G3GZU3

    2. XM_016967473.3 → XP_016822962.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, G3GZU3
      Conserved Domains (1) summary
      sd00017
      Location:211 → 231
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_007616983.4 → XP_007615173.1  zinc finger protein 518A

      See identical proteins and their annotated locations for XP_007615173.1

      UniProtKB/TrEMBL
      A0A8C2LR94, G3GZU3
      Conserved Domains (1) summary
      sd00017
      Location:211 → 231
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_007616960.4 → XP_007615150.1  zinc finger protein 518A

      See identical proteins and their annotated locations for XP_007615150.1

      UniProtKB/TrEMBL
      A0A8C2LR94, G3GZU3
      Conserved Domains (1) summary
      sd00017
      Location:211 → 231
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_007616972.4 → XP_007615162.1  zinc finger protein 518A

      See identical proteins and their annotated locations for XP_007615162.1

      UniProtKB/TrEMBL
      A0A8C2LR94, G3GZU3
      Conserved Domains (1) summary
      sd00017
      Location:211 → 231
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_027399679.2 → XP_027255480.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, G3GZU3

    7. XM_007616965.4 → XP_007615155.1  zinc finger protein 518A

      See identical proteins and their annotated locations for XP_007615155.1

      UniProtKB/TrEMBL
      A0A8C2LR94, G3GZU3
      Conserved Domains (1) summary
      sd00017
      Location:211 → 231
      ZF_C2H2; C2H2 Zn finger [structural motif]

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048596.1 Alternate CriGri-PICRH-1.0

      Range
      20659425..20679845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027407342.2 → XP_027263143.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45
      Related
      ENSCGRP00015047522.1, ENSCGRT00015068889.1

    2. XM_027407347.2 → XP_027263148.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45

    3. XM_027407345.2 → XP_027263146.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45
      Related
      ENSCGRP00015054333.1, ENSCGRT00015062536.1

    4. XM_027407348.2 → XP_027263149.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45
      Related
      ENSCGRP00015048098.1, ENSCGRT00015067152.1

    5. XM_027407344.2 → XP_027263145.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45
      Related
      ENSCGRP00015049780.1, ENSCGRT00015082575.1

    6. XM_027407343.2 → XP_027263144.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45
      Related
      ENSCGRP00015046436.1, ENSCGRT00015048454.1

    7. XM_027407349.2 → XP_027263150.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45

    8. XM_027407346.2 → XP_027263147.1  zinc finger protein 518A

      UniProtKB/TrEMBL
      A0A8C2LR94, A0A9J7FM45
      Related
      ENSCGRP00015059125.1, ENSCGRT00015050616.1
    Nucleotide Protein Strain
    Heading Accession and Version

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