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    Vcf2 VCP nuclear cofactor family member 2 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100759413, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Vcf2
    Gene description
    VCP nuclear cofactor family member 2
    Locus tag
    I79_006404
    See related
    Ensembl:ENSCGRG00015018307
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Also known as
    Fam104b
    Orthologs
    human mouse all
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    Genomic context

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    See Vcf2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613780.1 (175472..290873, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (109040090..109162862)

    NW_003613780.1Genomic Context describing neighboring genes Neighboring gene TATA box-binding protein-associated factor RNA polymerase I subunit B-like Neighboring gene protein FAM156A/FAM156B Neighboring gene endogenous retrovirus group K member 6 Pol protein Neighboring gene 5'-aminolevulinate synthase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein FAM104B
    Names
    Protein FAM104A
    family with sequence similarity 104 member B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613780.1 Reference CriGri_1.0 Primary Assembly

      Range
      175472..290873 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035454351.1 → XP_035310242.1  protein FAM104B isoform X3

      UniProtKB/TrEMBL
      A0A9J7K9X5
      Conserved Domains (1) summary
      pfam15434
      Location:50 → 159
      FAM104; Family 104

    2. XM_035454350.1 → XP_035310241.1  protein FAM104B isoform X2

      UniProtKB/TrEMBL
      A0A9J7H7D4
      Conserved Domains (1) summary
      pfam15434
      Location:59 → 169
      FAM104; Family 104

    3. XM_007640908.2 → XP_007639098.1  protein FAM104B isoform X1

    4. XM_027435071.2 → XP_027290872.1  protein FAM104B isoform X4

    5. XM_027435070.2 → XP_027290871.1  protein FAM104B isoform X1

    6. XM_035454349.1 → XP_035310240.1  protein FAM104B isoform X1

    RNA

    1. XR_004772862.1 RNA Sequence

    2. XR_004772861.1 RNA Sequence

    3. XR_004772859.1 RNA Sequence

    4. XR_004772858.1 RNA Sequence

    5. XR_004772860.1 RNA Sequence

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048604.1 Alternate CriGri-PICRH-1.0

      Range
      109040090..109162862
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035449884.1 → XP_035305775.1  protein FAM104B isoform X2

      UniProtKB/TrEMBL
      A0A9J7H7D4
      Related
      ENSCGRP00015058764.1, ENSCGRT00015074447.1
      Conserved Domains (1) summary
      pfam15434
      Location:59 → 169
      FAM104; Family 104

    2. XM_035449885.1 → XP_035305776.1  protein FAM104B isoform X3

      UniProtKB/TrEMBL
      A0A9J7K9X5
      Conserved Domains (1) summary
      pfam15434
      Location:50 → 159
      FAM104; Family 104

    3. XM_035449883.1 → XP_035305774.1  protein FAM104B isoform X1

      UniProtKB/TrEMBL
      A0A9J7GJ80

    4. XM_027432023.2 → XP_027287824.1  protein FAM104B isoform X1

      UniProtKB/TrEMBL
      A0A9J7GJ80

    RNA

    1. XR_003488220.2 RNA Sequence

    2. XR_003488221.2 RNA Sequence

    3. XR_003488219.2 RNA Sequence

    4. XR_003488217.2 RNA Sequence

    5. XR_003488224.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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