U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100790907 heterogeneous nuclear ribonucleoprotein Q [ Glycine max (soybean) ]

    Gene ID: 100790907, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100790907
    Gene description
    heterogeneous nuclear ribonucleoprotein Q
    Locus tag
    GLYMA_03G260500v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100790907 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 3 NC_016090.4 (46599501..46606453, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 3 NC_016090.3 (45427400..45434254, complement)

    Chromosome 3 - NC_016090.4Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 1 Neighboring gene uncharacterized LOC106798122 Neighboring gene probable L-gulonolactone oxidase 6 Neighboring gene uncharacterized LOC100777742

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    heterogeneous nuclear ribonucleoprotein Q
    Names
    heterogeneous nuclear ribonucleoprotein R

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016090.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      46599501..46606453 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003521775.4 → XP_003521823.1  heterogeneous nuclear ribonucleoprotein Q isoform X2

      See identical proteins and their annotated locations for XP_003521823.1

      UniProtKB/TrEMBL
      C6TNJ7, I1JS33
      Conserved Domains (1) summary
      TIGR01648
      Location:102 → 447
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    2. XM_041014252.1 → XP_040870186.1  heterogeneous nuclear ribonucleoprotein Q isoform X1

      UniProtKB/TrEMBL
      C6TNJ7
      Conserved Domains (1) summary
      TIGR01648
      Location:102 → 373
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    3. XM_006577291.3 → XP_006577354.1  heterogeneous nuclear ribonucleoprotein Q isoform X2

      See identical proteins and their annotated locations for XP_006577354.1

      UniProtKB/TrEMBL
      C6TNJ7, I1JS33
      Conserved Domains (1) summary
      TIGR01648
      Location:102 → 447
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    4. XM_041014253.1 → XP_040870187.1  heterogeneous nuclear ribonucleoprotein Q isoform X1

      UniProtKB/TrEMBL
      C6TNJ7
      Conserved Domains (1) summary
      TIGR01648
      Location:102 → 373
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases