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    LOC100799625 protein INAPERTURATE POLLEN1 [ Glycine max (soybean) ]

    Gene ID: 100799625, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100799625
    Gene description
    protein INAPERTURATE POLLEN1
    Locus tag
    GLYMA_15G182700v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100799625 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 15 NC_038251.2 (18014884..18016497, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 15 NC_038251.1 (17972772..17974708, complement)

    Chromosome 15 - NC_038251.2Genomic Context describing neighboring genes Neighboring gene sucrose synthase Neighboring gene protein MAIN-LIKE 1-like Neighboring gene phosphoinositide phosphatase-like protein Neighboring gene GDSL esterase/lipase 4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein INAPERTURATE POLLEN1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038251.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      18014884..18016497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006597829.3 → XP_006597892.1  protein INAPERTURATE POLLEN1

      UniProtKB/TrEMBL
      K7MC77
      Conserved Domains (1) summary
      pfam14144
      Location:35 → 109
      DOG1; Seed dormancy control
    Nucleotide Protein
    Heading Accession and Version

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