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    LOC100832938 60S ribosomal protein L24 [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100832938, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100832938
    Gene description
    60S ribosomal protein L24
    Locus tag
    BRADI_2g53220v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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    Genomic context

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    See LOC100832938 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (52168039..52170919)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (52422442..52425334)

    Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100832316 Neighboring gene zinc finger protein VAR3, chloroplastic Neighboring gene putative pentatricopeptide repeat-containing protein At3g15930 Neighboring gene pentatricopeptide repeat-containing protein At5g15010, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L24

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      52168039..52170919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003564427.4 → XP_003564475.1  60S ribosomal protein L24

      UniProtKB/TrEMBL
      I1HSS3
      Conserved Domains (1) summary
      pfam01246
      Location:4 → 65
      Ribosomal_L24e; Ribosomal protein L24e

    2. XM_024460060.1 → XP_024315828.1  60S ribosomal protein L24

      UniProtKB/TrEMBL
      I1HSS3
      Conserved Domains (1) summary
      pfam01246
      Location:4 → 65
      Ribosomal_L24e; Ribosomal protein L24e

    3. XM_024460061.1 → XP_024315829.1  60S ribosomal protein L24

      UniProtKB/TrEMBL
      I1HSS3
      Conserved Domains (1) summary
      pfam01246
      Location:4 → 65
      Ribosomal_L24e; Ribosomal protein L24e
    Nucleotide Protein Strain
    Heading Accession and Version

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