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    LOC100836738 protein TONNEAU 1a [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100836738, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100836738
    Gene description
    protein TONNEAU 1a
    Locus tag
    BRADI_1g02310v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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    Genomic context

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    See LOC100836738 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (1563644..1577986)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (1563634..1577975)

    Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene wall-associated receptor kinase 5 Neighboring gene uncharacterized LOC100842692 Neighboring gene protein TONNEAU 1b-like Neighboring gene heat shock protein 81-1 Neighboring gene WRKY transcription factor 44 Neighboring gene enoyl-[acyl-carrier-protein] reductase, mitochondrial Neighboring gene uncharacterized LOC112270150

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein TONNEAU 1a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      1563644..1577986
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010238526.3 → XP_010236828.1  protein TONNEAU 1a

      See identical proteins and their annotated locations for XP_010236828.1

      UniProtKB/TrEMBL
      I1GL33, I1IVB5
      Conserved Domains (1) summary
      pfam09398
      Location:62 → 138
      FOP_dimer; FOP N terminal dimerization domain

    2. XM_003562678.4 → XP_003562726.1  protein TONNEAU 1a

      See identical proteins and their annotated locations for XP_003562726.1

      UniProtKB/TrEMBL
      I1GL33, I1IVB5
      Conserved Domains (1) summary
      pfam09398
      Location:62 → 138
      FOP_dimer; FOP N terminal dimerization domain
    Nucleotide Protein Strain
    Heading Accession and Version

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