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    Spin2j spindlin family, member 2J [ Mus musculus (house mouse) ]

    Gene ID: 100862314, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Spin2jprovided by MGI
    Official Full Name
    spindlin family, member 2Jprovided by MGI
    Primary source
    MGI:MGI:5434992
    See related
    Ensembl:ENSMUSG00000095770 AllianceGenome:MGI:5434992
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm21637
    Summary
    Predicted to enable methylated histone binding activity. Predicted to be located in cytosol and nucleoplasm. Orthologous to human SPIN2A (spindlin family member 2A) and SPIN2B (spindlin family member 2B). [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Spin2j in Genome Data Viewer
    Location:
    X A3.1; X
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (31521693..31523640)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (31960926..31962873)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 21420 Neighboring gene BTB domain containing 35, family member 25 Neighboring gene BTB domain containing 35, family member 22 Neighboring gene predicted gene, 46695

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC143459

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables methylated histone binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    spindlin family, member 2-like
    Names
    spindlin-2A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001270685.1 → NP_001257614.1  spindlin family, member 2-like

      See identical proteins and their annotated locations for NP_001257614.1

      Status: VALIDATED

      Source sequence(s)
      CT868697
      Consensus CDS
      CCDS57740.1
      UniProtKB/TrEMBL
      A0A140T8V2, E9PWJ8, Q149L1
      Related
      ENSMUSP00000100756.3, ENSMUST00000105124.3
      Conserved Domains (1) summary
      pfam02513
      Location:29 → 78
      Spin-Ssty; Spin/Ssty Family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      31521693..31523640
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006536332.3 → XP_006536395.1  spindlin family, member 2-like isoform X1

      See identical proteins and their annotated locations for XP_006536395.1

      UniProtKB/TrEMBL
      A0A140T8V2, E9PWJ8, Q149L1
      Conserved Domains (1) summary
      pfam02513
      Location:29 → 78
      Spin-Ssty; Spin/Ssty Family

    2. XM_006536333.2 → XP_006536396.1  spindlin family, member 2-like isoform X1

      See identical proteins and their annotated locations for XP_006536396.1

      UniProtKB/TrEMBL
      A0A140T8V2, E9PWJ8, Q149L1
      Conserved Domains (1) summary
      pfam02513
      Location:29 → 78
      Spin-Ssty; Spin/Ssty Family
    Nucleotide Protein
    Heading Accession and Version

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