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    DMRTA1 DMRT like family A1 [ Pan paniscus (pygmy chimpanzee) ]

    Gene ID: 100976886, updated on 8-Mar-2024

    Summary

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    Gene symbol
    DMRTA1
    Gene description
    DMRT like family A1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan paniscus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See DMRTA1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 11 NC_073260.2 (102107167..102112823, complement)
    RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 9 NC_073258.1 (102109835..102118768, complement)

    Chromosome 11 - NC_073260.2Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit a-like Neighboring gene NADH-ubiquinone oxidoreductase chain 1-like Neighboring gene uncharacterized LOC134728584 Neighboring gene uncharacterized LOC103783677

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sex differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    doublesex- and mab-3-related transcription factor A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073260.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

      Range
      102107167..102112823 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003830689.7 → XP_003830737.2  doublesex- and mab-3-related transcription factor A1

      UniProtKB/TrEMBL
      A0A2R9AH32
      Conserved Domains (2) summary
      cd14417
      Location:325 → 364
      CUE_DMA_DMRTA1; CUE-like DMA domain found in doublesex- and mab-3-related transcription factor A1 (DMRTA1) and similar proteins
      pfam00751
      Location:93 → 139
      DM; DM DNA binding domain
    Nucleotide Protein
    Heading Accession and Version

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