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    LOC101074143 protein tyrosine phosphatase receptor type G [ Takifugu rubripes (torafugu) ]

    Gene ID: 101074143, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC101074143
    Gene description
    protein tyrosine phosphatase receptor type G
    See related
    Ensembl:ENSTRUG00000000403
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Also known as
    ptprg
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    Genomic context

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    See LOC101074143 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 19 NC_042303.1 (4087291..4229783)
    101 previous assembly FUGU5 (GCF_000180615.1) 19 NC_018908.1 (2139632..2192923)

    Chromosome 19 - NC_042303.1Genomic Context describing neighboring genes Neighboring gene fragile histidine triad diadenosine triphosphatase Neighboring gene uncharacterized LOC115246812 Neighboring gene uncharacterized LOC115246813 Neighboring gene uncharacterized LOC105417800 Neighboring gene uncharacterized LOC115247015 Neighboring gene chromosome 19 C3orf14 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042303.1 Reference fTakRub1.2 Primary Assembly

      Range
      4087291..4229783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029826708.1 → XP_029682568.1  LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase gamma

      UniProtKB/TrEMBL
      A0A674NN39
      Related
      ENSTRUP00000074663.1, ENSTRUT00000079238.1
      Conserved Domains (3) summary
      smart00060
      Location:354 → 432
      FN3; Fibronectin type 3 domain
      cd03122
      Location:77 → 325
      alpha_CARP_receptor_like; Carbonic anhydrase alpha related protein, receptor_like subfamily. Carbonic anhydrase related proteins (CARPs) are sequence similar to carbonic anhydrases. Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
      cl28904
      Location:810 → 1082
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
    Nucleotide Protein
    Heading Accession and Version

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