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    ror1 receptor tyrosine kinase-like orphan receptor 1 [ Takifugu rubripes (torafugu) ]

    Gene ID: 101078954, updated on 11-Apr-2024

    Summary

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    Gene symbol
    ror1
    Gene description
    receptor tyrosine kinase-like orphan receptor 1
    See related
    Ensembl:ENSTRUG00000003110
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Orthologs
    human zebrafish all
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    Genomic context

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    See ror1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 20 NC_042304.1 (13911304..13987854, complement)
    101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004072151.1 (3747..22606, complement)

    Chromosome 20 - NC_042304.1Genomic Context describing neighboring genes Neighboring gene Janus kinase 1 Neighboring gene ribonucleoprotein, PTB-binding 2 Neighboring gene cache domain containing 1 Neighboring gene phosphoglucomutase 1 Neighboring gene EF-hand calcium binding domain 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inactive tyrosine-protein kinase transmembrane receptor ROR1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042304.1 Reference fTakRub1.2 Primary Assembly

      Range
      13911304..13987854 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029828320.1 → XP_029684180.1  inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X3

      UniProtKB/TrEMBL
      A0A674PIX1, H2S4F7
      Related
      ENSTRUP00000085645.1, ENSTRUT00000088586.1

    2. XM_029828319.1 → XP_029684179.1  inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X2

      UniProtKB/TrEMBL
      H2S4F7

    3. XM_029828318.1 → XP_029684178.1  inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X1

      UniProtKB/TrEMBL
      A0A674MNI4, H2S4F7
      Related
      ENSTRUP00000063037.1, ENSTRUT00000085079.1

    4. XM_029828321.1 → XP_029684181.1  inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X4

      UniProtKB/TrEMBL
      A0A674NS08, H2S4F7
      Related
      ENSTRUP00000076493.1, ENSTRUT00000064427.1
      Conserved Domains (4) summary
      smart00130
      Location:249 → 330
      KR; Kringle domain
      cd05090
      Location:406 → 688
      PTKc_Ror1; Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1
      pfam07679
      Location:3 → 85
      I-set; Immunoglobulin I-set domain
      cl02447
      Location:104 → 245
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
    Nucleotide Protein
    Heading Accession and Version

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