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    LOC101120341 acid-sensing ion channel 2 [ Ovis aries (sheep) ]

    Gene ID: 101120341, updated on 7-Feb-2024

    Summary

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    Gene symbol
    LOC101120341
    Gene description
    acid-sensing ion channel 2
    See related
    EnsemblRapid:ENSOARG00020017317
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Also known as
    ASIC2
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    Genomic context

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    See LOC101120341 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 11 NC_056064.1 (16680762..16977277)

    Chromosome 11 - NC_056064.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121820556 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene sperm acrosome associated 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056064.1 Chromosome 11 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Ovis aries Rambouillet Genome sequencing and assembly
    • BioProject: PRJNA414087
    • Analysis date: Thu Jan 09 10:41:41 2025

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ligand-gated sodium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acid-sensing ion channel 2
    Names
    acid sensing (proton gated) ion channel 2
    acid sensing ion channel subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056064.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      16680762..16977277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027975288.3 → XP_027831089.1  acid-sensing ion channel 2

      UniProtKB/TrEMBL
      A0A836D1Z6
      Related
      ENSOARP00020022326.1, ENSOART00020026904.2
    Nucleotide Protein Strain
    Heading Accession and Version

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