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    CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 [ Ovis aries (sheep) ]

    Gene ID: 101120847, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CDK5R1
    Gene description
    cyclin dependent kinase 5 regulatory subunit 1
    See related
    EnsemblRapid:ENSOARG00020028962
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See CDK5R1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 11 NC_056064.1 (17452820..17457056, complement)

    Chromosome 11 - NC_056064.1Genomic Context describing neighboring genes Neighboring gene myosin ID Neighboring gene small ribosomal subunit protein eS24-like Neighboring gene small ribosomal subunit protein eS26 Neighboring gene proline-rich protein 2-like Neighboring gene proteasome 26S subunit, non-ATPase 11 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056064.1 Chromosome 11 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Ovis aries Rambouillet Genome sequencing and assembly
    • BioProject: PRJNA414087
    • Analysis date: Thu Jan 09 10:41:41 2025

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein kinase 5 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-dependent kinase 5 activator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056064.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      17452820..17457056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027975285.3 → XP_027831086.1  cyclin-dependent kinase 5 activator 1

      UniProtKB/TrEMBL
      A0A6P7EM36, W5P1D3
      Related
      ENSOARP00020043736.1, ENSOART00020065904.1
      Conserved Domains (1) summary
      pfam03261
      Location:20 → 293
      CDK5_activator; Cyclin-dependent kinase 5 activator protein
    Nucleotide Protein Strain
    Heading Accession and Version

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