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    psmg1 proteasome (prosome, macropain) assembly chaperone 1 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101170042, updated on 8-Mar-2024

    Summary

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    Gene symbol
    psmg1
    Gene description
    proteasome (prosome, macropain) assembly chaperone 1
    See related
    EnsemblRapid:ENSORLG00000014314
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    human zebrafish all
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    Genomic context

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    See psmg1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 14 NC_019872.2 (24913335..24927896, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 14 NC_019872.1 (26530855..26545344, complement)

    Chromosome 14 - NC_019872.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 37 member 2 Neighboring gene coiled-coil domain containing 15 Neighboring gene chromosome 14 C11orf87 homolog Neighboring gene MYB binding protein (P160) 1a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proteasome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome core complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome assembly chaperone 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019872.2 Reference ASM223467v1 Primary Assembly

      Range
      24913335..24927896 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004076777.4 → XP_004076825.1  proteasome assembly chaperone 1

      UniProtKB/TrEMBL
      A0A3P9I9D6, H2MH49
      Related
      ENSORLP00000017947.2, ENSORLT00000017948.3
      Conserved Domains (1) summary
      pfam16094
      Location:1 → 278
      PAC1; Proteasome assembly chaperone 4
    Nucleotide Protein
    Heading Accession and Version

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