U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    BTBD8 BTB domain containing 8 [ Orcinus orca (killer whale) ]

    Gene ID: 101289356, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    BTBD8
    Gene description
    BTB domain containing 8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Orcinus orca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
    Also known as
    KIAA1107
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BTBD8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 1 NC_064559.1 (131733779..131841929, complement)

    Chromosome 1 - NC_064559.1Genomic Context describing neighboring genes Neighboring gene glomulin, FKBP associated protein Neighboring gene chromosome 1 C1orf146 homolog Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC125965329 Neighboring gene lysophosphatidylcholine acyltransferase 2B-like Neighboring gene ferritin heavy chain-like Neighboring gene epoxide hydrolase 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_064559.1 Chromosome 1 Reference mOrcOrc1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection terminus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    BTB/POZ domain-containing protein 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOrcOrc1.1 Primary Assembly

    Genomic

    1. NC_064559.1 Reference mOrcOrc1.1 Primary Assembly

      Range
      131733779..131841929 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_049714038.1 → XP_049569995.1  BTB/POZ domain-containing protein 8 isoform X6

    2. XM_033432672.2 → XP_033288563.1  BTB/POZ domain-containing protein 8 isoform X2

      Conserved Domains (4) summary
      cd18285
      Location:43 → 144
      BTB1_POZ_BTBD8; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cd18286
      Location:205 → 325
      BTB2_POZ_BTBD8; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cd18490
      Location:332 → 394
      BACK_BTBD8; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cl28903
      Location:423 → 477
      BACK; BACK (BTB and C-terminal Kelch) domain

    3. XM_049714024.1 → XP_049569981.1  BTB/POZ domain-containing protein 8 isoform X3

    4. XM_049714034.1 → XP_049569991.1  BTB/POZ domain-containing protein 8 isoform X5

    5. XM_004263017.3 → XP_004263065.2  BTB/POZ domain-containing protein 8 isoform X1

      Conserved Domains (5) summary
      cd18285
      Location:43 → 144
      BTB1_POZ_BTBD8; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cd18286
      Location:205 → 325
      BTB2_POZ_BTBD8; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cd18490
      Location:332 → 394
      BACK_BTBD8; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      pfam15363
      Location:1762 → 1806
      DUF4596; Domain of unknown function (DUF4596)
      cl28903
      Location:423 → 477
      BACK; BACK (BTB and C-terminal Kelch) domain

    6. XM_004263021.3 → XP_004263069.2  BTB/POZ domain-containing protein 8 isoform X4

      Conserved Domains (4) summary
      cd18286
      Location:1 → 76
      BTB2_POZ_BTBD8; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      cd18490
      Location:83 → 145
      BACK_BTBD8; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 8 (BTBD8)
      pfam15363
      Location:1513 → 1557
      DUF4596; Domain of unknown function (DUF4596)
      cl28903
      Location:174 → 228
      BACK; BACK (BTB and C-terminal Kelch) domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.