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    LOC101654674 olfactory receptor 5B12-like [ Echinops telfairi (small Madagascar hedgehog) ]

    Gene ID: 101654674, updated on 20-Sep-2024

    Summary

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    Gene symbol
    LOC101654674
    Gene description
    olfactory receptor 5B12-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Echinops telfairi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
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    Genomic context

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    See LOC101654674 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111316.1 (3743184..3744128, complement)
    101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558796.1 (2416548..2417492)

    NW_022111316.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 5B2-like Neighboring gene olfactory receptor 5B2-like Neighboring gene olfactory receptor 5B12-like Neighboring gene olfactory receptor 5B12-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    olfactory receptor 5B12-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM31398v2 Primary Assembly

    Genomic

    1. NW_022111316.1 Reference ASM31398v2 Primary Assembly

      Range
      3743184..3744128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004714986.1 → XP_004715043.1  olfactory receptor 5B12-like

      Conserved Domains (1) summary
      cd15407
      Location:23 → 301
      7tmA_OR5B-like; olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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