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    RBL2 RB transcriptional corepressor like 2 [ Mustela putorius furo (domestic ferret) ]

    Gene ID: 101670573, updated on 8-Mar-2024

    Summary

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    Gene symbol
    RBL2
    Gene description
    RB transcriptional corepressor like 2
    See related
    Ensembl:ENSMPUG00000003315
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mustela putorius furo (sub-species: furo)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
    Orthologs
    human mouse all
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    Genomic context

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    See RBL2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421304.1 (14757856..14812645)
    101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569154.1 (6706129..6760767)

    NW_025421304.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106004998 Neighboring gene chromodomain helicase DNA binding protein 9 Neighboring gene U4 spliceosomal RNA Neighboring gene 60S ribosomal protein L5-like Neighboring gene hsc70-interacting protein-like Neighboring gene AKT interacting protein Neighboring gene RPGRIP1 like Neighboring gene FTO alpha-ketoglutarate dependent dioxygenase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
    2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retinoblastoma-like protein 2
    Names
    retinoblastoma-like 2 (p130)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1176430v1.1 Primary Assembly

    Genomic

    1. NW_025421304.1 Reference ASM1176430v1.1 Primary Assembly

      Range
      14757856..14812645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004744185.3 → XP_004744242.1  retinoblastoma-like protein 2 isoform X1

      UniProtKB/TrEMBL
      G9KKF2, M3XW33
      Related
      ENSMPUP00000003283.1
      Conserved Domains (3) summary
      pfam01857
      Location:834 → 1016
      RB_B; Retinoblastoma-associated protein B domain
      pfam01858
      Location:417 → 608
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:104 → 236
      DUF3452; Domain of unknown function (DUF3452)

    2. XM_045076075.1 → XP_044932010.1  retinoblastoma-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8U0UXJ0, G9KKF2
      Conserved Domains (1) summary
      smart00385
      Location:848 → 931
      CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma

    3. XM_004744188.3 → XP_004744245.1  retinoblastoma-like protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8U0MJ88, G9KKF2
      Conserved Domains (3) summary
      pfam01857
      Location:703 → 885
      RB_B; Retinoblastoma-associated protein B domain
      pfam01858
      Location:286 → 477
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:1 → 105
      DUF3452; Domain of unknown function (DUF3452)

    4. XM_045076076.1 → XP_044932011.1  retinoblastoma-like protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8U0RYV1, G9KKF2
      Conserved Domains (4) summary
      pfam01858
      Location:201 → 392
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:1 → 20
      DUF3452; Domain of unknown function (DUF3452)
      cd20606
      Location:618 → 807
      CYCLIN_RBL2; cyclin box found in retinoblastoma-like protein 2 (RBL2) and similar proteins
      cl41773
      Location:483 → 621
      SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4

    5. XM_004744189.3 → XP_004744246.1  retinoblastoma-like protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8U0RYV1, G9KKF2
      Conserved Domains (4) summary
      pfam01858
      Location:201 → 392
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:1 → 20
      DUF3452; Domain of unknown function (DUF3452)
      cd20606
      Location:618 → 807
      CYCLIN_RBL2; cyclin box found in retinoblastoma-like protein 2 (RBL2) and similar proteins
      cl41773
      Location:483 → 621
      SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
    Nucleotide Protein
    Heading Accession and Version

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