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    LOC101743224 attacin-like [ Bombyx mori (domestic silkworm) ]

    Gene ID: 101743224, updated on 9-Feb-2024

    Summary

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    Gene symbol
    LOC101743224
    Gene description
    attacin-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bombyx mori
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
    Also known as
    attacin
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    Genomic context

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    See LOC101743224 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 6 NC_085112.1 (16184991..16186603)
    103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 6 NC_051363.1 (16166512..16167752)

    Chromosome 6 - NC_085112.1Genomic Context describing neighboring genes Neighboring gene cadherin-89D Neighboring gene uncharacterized LOC110385287 Neighboring gene collagen alpha chain CG42342 Neighboring gene attacin 1 Neighboring gene uncharacterized LOC134199101 Neighboring gene uncharacterized LOC105841712

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    attacin-like
    Names
    attacin-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3026992v2 Primary Assembly

    Genomic

    1. NC_085112.1 Reference ASM3026992v2 Primary Assembly

      Range
      16184991..16186603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004926701.4 → XP_004926758.1  attacin-like

      See identical proteins and their annotated locations for XP_004926758.1

      UniProtKB/TrEMBL
      A0A8R1WKH0, D2XRA5
      Conserved Domains (2) summary
      pfam03768
      Location:27 → 92
      Attacin_N; Attacin, N-terminal region
      pfam03769
      Location:94 → 214
      Attacin_C; Attacin, C-terminal region
    Nucleotide Protein
    Heading Accession and Version

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