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    Slc10a2 solute carrier family 10 member 2 [ Mesocricetus auratus (golden hamster) ]

    Gene ID: 101840832, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Slc10a2
    Gene description
    solute carrier family 10 member 2
    See related
    EnsemblRapid:ENSMAUG00000011194
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mesocricetus auratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
    Orthologs
    human mouse all
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    Genomic context

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    See Slc10a2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429212.1 (13185654..13204463)
    102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801676.1 (5681532..5702160)

    NW_024429212.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121135135 Neighboring gene U6 spliceosomal RNA Neighboring gene protein tyrosine phosphatase type IVA 1-like Neighboring gene uncharacterized LOC110342263 Neighboring gene SHC binding and spindle associated 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables bile acid:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bile acid and bile salt transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ileal sodium/bile acid cotransporter
    Names
    solute carrier family 10 (sodium/bile acid cotransporter family), member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCM_Maur_2.0 Primary Assembly

    Genomic

    1. NW_024429212.1 Reference BCM_Maur_2.0 Primary Assembly

      Range
      13185654..13204463
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005077362.4 → XP_005077419.1  ileal sodium/bile acid cotransporter

      See identical proteins and their annotated locations for XP_005077419.1

      UniProtKB/TrEMBL
      A0A1U7QN63
      Related
      ENSMAUP00000010220.1, ENSMAUT00000014088.2
      Conserved Domains (1) summary
      TIGR00841
      Location:29 → 315
      bass; bile acid transporter
    Nucleotide Protein Strain
    Heading Accession and Version

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