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    dbndd1 dysbindin domain containing 1 [ Xiphophorus maculatus (southern platyfish) ]

    Gene ID: 102220169, updated on 10-Mar-2024

    Summary

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    Gene symbol
    dbndd1
    Gene description
    dysbindin domain containing 1
    See related
    Ensembl:ENSXMAG00000003066
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphophorus maculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
    Orthologs
    human zebrafish all
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    Genomic context

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    See dbndd1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current X_maculatus-5.0-male (GCF_002775205.1) 4 NC_036446.1 (15354975..15373642)
    101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372306.1 (171753..189148, complement)

    Chromosome 4 - NC_036446.1Genomic Context describing neighboring genes Neighboring gene forkhead box F1 Neighboring gene methenyltetrahydrofolate synthetase domain containing Neighboring gene AFG3-like protein 1 Neighboring gene differentially expressed in FDCP 8 homolog Neighboring gene melanocortin 1 receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dysbindin domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference X_maculatus-5.0-male Primary Assembly

    Genomic

    1. NC_036446.1 Reference X_maculatus-5.0-male Primary Assembly

      Range
      15354975..15373642
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005804949.2 → XP_005805006.1  dysbindin domain-containing protein 1

      See identical proteins and their annotated locations for XP_005805006.1

      UniProtKB/TrEMBL
      M3ZLH4
      Related
      ENSXMAP00000003066.1, ENSXMAT00000003071.2
      Conserved Domains (1) summary
      pfam04440
      Location:13 → 142
      Dysbindin; Dysbindin (Dystrobrevin binding protein 1)
    Nucleotide Protein Strain
    Heading Accession and Version

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