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    LOC102347380 cytochrome P450 1A1 [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102347380, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC102347380
    Gene description
    cytochrome P450 1A1
    See related
    Ensembl:ENSLACG00000011273
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Orthologs
    zebrafish all
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    Genomic context

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    See LOC102347380 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 1 NC_088139.1 (84826815..84859261)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005820334.1 (586102..618609, complement)

    Chromosome 1 - NC_088139.1Genomic Context describing neighboring genes Neighboring gene transmembrane channel-like protein 2-A Neighboring gene aldehyde dehydrogenase 1A1 Neighboring gene uncharacterized SI:DKEY-96L17.6 Neighboring gene annexin A1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables steroid 17-alpha-monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hormone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in progesterone metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 1A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088139.1 Reference fLatCha1.pri

      Range
      84826815..84859261
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006006298.2 → XP_006006360.2  cytochrome P450 1A1

      UniProtKB/TrEMBL
      H3AT25
    Nucleotide Protein
    Heading Accession and Version

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