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    LOC102586688 trypsin inhibitor 1-like [ Solanum tuberosum (potato) ]

    Gene ID: 102586688, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC102586688
    Gene description
    trypsin inhibitor 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum tuberosum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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    Genomic context

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    See LOC102586688 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239373.1 (116271..117641)

    NW_006239373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102595296 Neighboring gene uncharacterized LOC102586453 Neighboring gene trypsin inhibitor 1-like Neighboring gene trypsin inhibitor 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006239373.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to wounding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trypsin inhibitor 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SolTub_3.0 Primary Assembly

    Genomic

    1. NW_006239373.1 Reference SolTub_3.0 Primary Assembly

      Range
      116271..117641
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006363607.2 → XP_006363669.1  trypsin inhibitor 1-like

      UniProtKB/TrEMBL
      M1BHH1
      Conserved Domains (1) summary
      pfam00280
      Location:31 → 94
      potato_inhibit; Potato inhibitor I family
    Nucleotide Protein
    Heading Accession and Version

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