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    Gm30083 predicted gene, 30083 [ Mus musculus (house mouse) ]

    Gene ID: 102631856, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gm30083provided by MGI
    Official Full Name
    predicted gene, 30083provided by MGI
    Primary source
    MGI:MGI:5589242
    See related
    Ensembl:ENSMUSG00000115726 AllianceGenome:MGI:5589242
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 10.1) See more
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    Genomic context

    See Gm30083 in Genome Data Viewer
    Location:
    14 B; 14
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (33710374..33738860, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (33988417..34016903, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene retinol binding protein 3, interstitial Neighboring gene zinc finger protein 488 Neighboring gene STARR-seq mESC enhancer starr_36360 Neighboring gene predicted gene 5460 Neighboring gene RIKEN cDNA A630023A22 gene Neighboring gene anthrax toxin receptor-like Neighboring gene STARR-seq mESC enhancer starr_36361 Neighboring gene annexin A8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC102631856
    Names
    anthrax toxin receptor-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001374165.1NP_001361094.1  uncharacterized protein LOC102631856 isoform 1 precursor

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1).
      Source sequence(s)
      AC164099
      Consensus CDS
      CCDS88624.1
      UniProtKB/TrEMBL
      A0A2I3BPJ2
      Related
      ENSMUSP00000153809.2, ENSMUST00000227795.2
      Conserved Domains (2) summary
      pfam05587
      Location:247348
      Anth_Ig; Anthrax receptor extracellular domain
      cl00057
      Location:69249
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    2. NM_001374166.1NP_001361095.1  uncharacterized protein LOC102631856 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC164099
      Conserved Domains (2) summary
      pfam05587
      Location:190291
      Anth_Ig; Anthrax receptor extracellular domain
      cl00057
      Location:12192
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      33710374..33738860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006519765.3XP_006519828.1  uncharacterized protein LOC102631856 isoform X1

      See identical proteins and their annotated locations for XP_006519828.1

      Conserved Domains (2) summary
      pfam05587
      Location:190291
      Anth_Ig; Anthrax receptor extracellular domain
      cl00057
      Location:12192
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    2. XM_006519766.1XP_006519829.1  uncharacterized protein LOC102631856 isoform X2

      See identical proteins and their annotated locations for XP_006519829.1

      Conserved Domains (2) summary
      pfam05587
      Location:175276
      Anth_Ig; Anthrax receptor extracellular domain
      cl00057
      Location:7177
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    RNA

    1. XR_003951017.1 RNA Sequence