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    LOC102638047 sp110 nuclear body protein-like [ Mus musculus (house mouse) ]

    Gene ID: 102638047, updated on 27-Nov-2024

    Summary

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    Gene symbol
    LOC102638047
    Gene description
    sp110 nuclear body protein-like
    See related
    Ensembl:ENSMUSG00000079808
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See LOC102638047 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 Unlocalized Scaffold NT_166282.1 (122405..147852, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 Unlocalized Scaffold NT_166282.1 (122405..147904, complement)

    NT_166282.1Genomic Context describing neighboring genes Neighboring gene odorant receptor 131-2-like Neighboring gene uncharacterized LOC100041877 Neighboring gene uncharacterized LOC102637495 Neighboring gene uncharacterized LOC102637781

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    sp110 nuclear body protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001378739.1 → NP_001365668.1  sp110 nuclear body protein-like isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC168977
      UniProtKB/TrEMBL
      A0AAG1FCE8
      Related
      ENSMUSP00000111587.3, ENSMUST00000115924.3
      Conserved Domains (2) summary
      pfam01342
      Location:361 → 433
      SAND; SAND domain
      pfam03172
      Location:8 → 106
      HSR; HSR domain

    2. NM_001378740.1 → NP_001365669.1  sp110 nuclear body protein-like isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC168977
      Conserved Domains (1) summary
      pfam03172
      Location:8 → 106
      HSR; HSR domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NT_166282.1 Reference GRCm39 C57BL/6J

      Range
      122405..147852 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011249829.4 → XP_011248131.1  sp110 nuclear body protein-like isoform X4

      Conserved Domains (1) summary
      pfam03172
      Location:31 → 129
      HSR; HSR domain

    2. XM_011249825.4 → XP_011248127.1  sp110 nuclear body protein-like isoform X1

      Conserved Domains (2) summary
      pfam01342
      Location:387 → 459
      SAND; SAND domain
      pfam03172
      Location:31 → 129
      HSR; HSR domain

    3. XM_011249827.4 → XP_011248129.1  sp110 nuclear body protein-like isoform X2

      Conserved Domains (2) summary
      pfam01342
      Location:383 → 455
      SAND; SAND domain
      pfam03172
      Location:31 → 129
      HSR; HSR domain

    4. XM_011249828.4 → XP_011248130.1  sp110 nuclear body protein-like isoform X3

      Conserved Domains (3) summary
      PHA03377
      Location:162 → 355
      PHA03377; EBNA-3C; Provisional
      pfam01342
      Location:333 → 405
      SAND; SAND domain
      pfam03172
      Location:31 → 129
      HSR; HSR domain
    Nucleotide Protein
    Heading Accession and Version

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