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    LGALS3 galectin 3 [ Leptonychotes weddellii (Weddell seal) ]

    Gene ID: 102738399, updated on 10-Mar-2024

    Summary

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    Gene symbol
    LGALS3
    Gene description
    galectin 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Leptonychotes weddellii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
    Orthologs
    human mouse all
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    Genomic context

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    See LGALS3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383798.1 (391963..407970)

    NW_006383798.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 1 interacting protein 1 like Neighboring gene U6 spliceosomal RNA Neighboring gene DLG associated protein 5 Neighboring gene U6 spliceosomal RNA Neighboring gene F-box protein 34

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006383798 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables IgE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables laminin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in eosinophil chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in macrophage chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monocyte chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of extrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neutrophil chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of calcium ion import IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in immunological synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galectin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LepWed1.0 Primary Assembly

    Genomic

    1. NW_006383798.1 Reference LepWed1.0 Primary Assembly

      Range
      391963..407970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006736459.2 → XP_006736522.1  galectin-3

      UniProtKB/TrEMBL
      A0A2U3XYI2
      Conserved Domains (2) summary
      PRK07764
      Location:13 → 148
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd00070
      Location:152 → 279
      GLECT; Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may ...

    2. XM_031031369.1 → XP_030887229.1  galectin-3

      UniProtKB/TrEMBL
      A0A2U3XYI2
      Conserved Domains (2) summary
      PRK07764
      Location:13 → 148
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd00070
      Location:152 → 279
      GLECT; Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may ...
    Nucleotide Protein
    Heading Accession and Version

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