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    DLGAP5 DLG associated protein 5 [ Leptonychotes weddellii (Weddell seal) ]

    Gene ID: 102739293, updated on 10-Mar-2024

    Summary

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    Gene symbol
    DLGAP5
    Gene description
    DLG associated protein 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Leptonychotes weddellii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
    Orthologs
    human mouse all
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    Genomic context

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    See DLGAP5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383798.1 (411111..449828, complement)

    NW_006383798.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene galectin 3 Neighboring gene U6 spliceosomal RNA Neighboring gene F-box protein 34 Neighboring gene autophagy related 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006383798 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in centrosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in kinetochore assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic spindle organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle pole centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    disks large-associated protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LepWed1.0 Primary Assembly

    Genomic

    1. NW_006383798.1 Reference LepWed1.0 Primary Assembly

      Range
      411111..449828 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031031371.1 → XP_030887231.1  disks large-associated protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A7F8R244
      Conserved Domains (1) summary
      pfam03359
      Location:427 → 536
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    2. XM_006736463.2 → XP_006736526.1  disks large-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A2U3XYL9
      Conserved Domains (1) summary
      pfam03359
      Location:427 → 536
      GKAP; Guanylate-kinase-associated protein (GKAP) protein

    3. XM_031031373.1 → XP_030887233.1  disks large-associated protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A7F8R3N2

    4. XM_031031372.1 → XP_030887232.1  disks large-associated protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A7F8R1G8
      Conserved Domains (1) summary
      pfam03359
      Location:427 → 536
      GKAP; Guanylate-kinase-associated protein (GKAP) protein
    Nucleotide Protein
    Heading Accession and Version

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