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    TPP1 tripeptidyl peptidase 1 [ Panthera tigris (tiger) ]

    Gene ID: 102968271, updated on 15-Nov-2024

    Summary

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    Gene symbol
    TPP1
    Gene description
    tripeptidyl peptidase 1
    See related
    Ensembl:ENSPTIG00000013760
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Panthera tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
    Orthologs
    human mouse all
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    Genomic context

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    See TPP1 in Genome Data Viewer
    Location:
    chromosome: D1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) D1 NC_056669.1 (63023363..63030250, complement)
    101 previous assembly PanTig1.0 (GCF_000464555.1) Unplaced Scaffold NW_006711867.1 (988880..995804, complement)

    Chromosome D1 - NC_056669.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122230970 Neighboring gene uncharacterized LOC122230971 Neighboring gene integrin linked kinase Neighboring gene TATA-box binding protein associated factor 10 Neighboring gene dachsous cadherin-related 1 Neighboring gene mitochondrial ribosomal protein L17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tripeptidyl-peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripeptidyl-peptidase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Genomic

    1. NC_056669.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

      Range
      63023363..63030250 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007083161.3 → XP_007083223.1  tripeptidyl-peptidase 1

      UniProtKB/TrEMBL
      A0A8C9JY22
      Related
      ENSPTIP00000014287.1
      Conserved Domains (2) summary
      cd04056
      Location:208 → 566
      Peptidases_S53; Peptidase domain in the S53 family
      cd11377
      Location:43 → 182
      Pro-peptidase_S53; Activation domain of S53 peptidases
    Nucleotide Protein
    Heading Accession and Version

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